Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821510.1_cds_XP_016500785.1_14582
CDS Infomation

[gene=LOC107819212] [db_xref=GeneID:107819212] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016500785.1] [location=complement(17501..18844)] [gbkey=CDS]
Sequence

ATGAAACCGGATAACTCAACTAAAGTTAAAAGGAATCAAATACAAAAGGTTCCTTCATTC
CTGAGTGATGAGAATAAGGAAAGCGGTGAACGTGATCCTAAAGTGGTTTCACTTGGGCCT
TACCACCATGGAAAGGAGAAGCTCAAGTTTGTTCAGGATTTCAAGCCCATGGCCCTAGAC
ATGTTCATTGAAGGGAGTAATCAAGACAAAGCTTTCTTCCTTGGGGAAATTCTAAAGGAA
ATTGAATATGCTAAAAGTTGTTACCTCGAAGAATTCACGTGTATATATGATGACTTTTAT
TTTGCTGAAATGATGCTCCTTGATGCATGCTTCATTCTAAATATTATAGGGCCATGGGAT
CAGACATTTAAACGGAGCGAGACAATTGAGCATCTTGGTACTGCAGTTTATACCCTAAGT
AAACGTGATTTATATTTGCTTGAAAATCAGGTACCGTTGAGAATTCTCATGATCTTGGCT
AAATCTAGATATCCTGTAGATGAAAAAGGATTTATAGAGACGGCGGAAAGCTCTTGTTTT
AACATACTCTTCCATGAGGACATAAGATCATTGAAAGATAATAAACAAGGGACAACTGAT
ACCCCCCTTCACCTTCTTGAAATTTTCCGAAGATCAATCGTCACTGGCACCGGGGAAATC
CAACAACCACGTGTACGTCCTTGTGATCCTTTGTGTGATATTTTCAACAAGTTGGGATTA
TGTCTTGAATATTGGTGCTGTAGAAAAGATAAAACGTCAACTCGTGGCCGCGGGGGGTAT
GTGTTTCATTCAGTGACGGATCTGAAATCGAAGGGCATTCATTTCAGGCCTAGCGAGATT
GCGTCTTTAAATGGCGTAAGGTTTAGCCCCGCTGAATTCTGTCACTCCGCAAAGCTCAAA
CTCCCATATTGGTATGTTTCTCCGTACACCAGATCATTTTTCATGAACATGATTGCTTAT
GAGTTCTGTCCCAATGTTTTTACCGATAAAGCTGTGACTGCTTACGTGAATTTCATGAAA
TCACTTATTGTTTCACAAGAGGATGTCAAAGAGCTGCGAGAAAAGAAAATTTTAATGAAC
AGCTTAGGGAGTGACGAACAAGTGGTACAAGTCTATAAATCTTTGAATACTTATGGCACA
GAAGATGAATCTTTTTTCCACAAGGAGAAAAGGAATATCGAGGATCACTATAACAACAAA
ACCAGGACTTGGTTGTCTGAATTGAAAAATACATATTTTAACAGTCCCTGGTCTATAATT
GCTTTGGTTGGTTCTATTTTCCTCCTTTGTTCAGATATTGTCCAGACCTACTATGCAGTC
CACCCTTCAAAAGGAGGATCTTGA

Peptide Sequence

PEP ID

XP_016500785.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MKPDNSTKVKRNQIQKVPSFLSDENKESGERDPKVVSLGPYHHGKEKLKFVQDFKPMALD
MFIEGSNQDKAFFLGEILKEIEYAKSCYLEEFTCIYDDFYFAEMMLLDACFILNIIGPWD
QTFKRSETIEHLGTAVYTLSKRDLYLLENQVPLRILMILAKSRYPVDEKGFIETAESSCF
NILFHEDIRSLKDNKQGTTDTPLHLLEIFRRSIVTGTGEIQQPRVRPCDPLCDIFNKLGL
CLEYWCCRKDKTSTRGRGGYVFHSVTDLKSKGIHFRPSEIASLNGVRFSPAEFCHSAKLK
LPYWYVSPYTRSFFMNMIAYEFCPNVFTDKAVTAYVNFMKSLIVSQEDVKELREKKILMN
SLGSDEQVVQVYKSLNTYGTEDESFFHKEKRNIEDHYNNKTRTWLSELKNTYFNSPWSII
ALVGSIFLLCSDIVQTYYAVHPSKGGS

Transcript Sequence

Gene sequence data has not been registered.